Structure information

κ receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

8DZQ

SPECIES

Homo sapiens

RESOLUTION

2.820

PREFERRED CHAIN

A

REFERENCE

10.1038/S41586-023-06030-7

PUBLICATION DATE

May 3, 2023
|

NGL is a WebGL based 3D viewer powered by MMTF.

Download PDB file

Ligand Interaction Browser

Download list in excel
LigandAmino AcidGeneric NumberSegmentInteraction Type
Ligand
Amino Acid
Generic Number
Segment
Interaction Type
Ligand
Amino Acid
Generic Number
Segment
Interaction Type
SALVINORIN B METHOXYMETHYL ETHER L135 3.29x29 TM3 hydrophobic
SALVINORIN B METHOXYMETHYL ETHER M142 3.36x36 TM3 hydrophobic
SALVINORIN B METHOXYMETHYL ETHER W287 6.48x48 TM6 hydrophobic
SALVINORIN B METHOXYMETHYL ETHER I294 6.55x55 TM6 hydrophobic
SALVINORIN B METHOXYMETHYL ETHER Y312 7.35x34 TM7 hydrophobic
SALVINORIN B METHOXYMETHYL ETHER I316 7.39x38 TM7 hydrophobic
SALVINORIN B METHOXYMETHYL ETHER Y320 7.43x42 TM7 hydrophobic
LigandAmino AcidGeneric NumberSegmentInteraction Type
Showing 1 to 7 of 7 entries

Ligands

SALVINORIN B METHOXYMETHYL ETHER

3D interaction viewer Download PDB file
  |  

NGL is a WebGL based 3D viewer powered by MMTF.


Residue Diagrams

S N G V L G V V F V V S Y V A T I I V P 1 F N L A L A D A L V T T T M P F Q S T V 2 M T L T F I S T F M N Y Y D I S I V I K 3 A K I I N I C I W L L S S S V G I S A I 4 Y C V I I I L V P I V F A F I F V C I K M 5 L V V V A V F V V C W T P I H I F I L V 6 I P N L S S N T Y G L A I C F Y Y S S 7
Download: PNG | SVG
ICL1 ECL1 ICL2 ECL2 ICL3 ECL3 N-term C-term A I P V I I T A V Y S V V F V V G L V G N S L V M F V I I R Y T A T N I Y I F N L A L A D A L V T T T M P F Q S T V Y L M N G D V L C K I V I S I D Y Y N M F T S I F T L T M M S V D R Y I A V C H T P L K A K I I N I C I W L L S S S V G I S A I V L G D Y S W W D L F M K I C V F I F A F V I P V L I I I V C Y T L M I L R L K S V S R E K D R N L R R I T R L V L V V V A V F V V C W T P I H I F I L V E A L G S T A A L S S Y Y F C I A L G Y T N S S L N P I L Y A F L D E N F R D F K R C F C F
Download: PNG | SVG

Residue Table


GPCRdb(A)
GPCRdb(A)
κ receptor
TM3
3x29 3.29x29 I135
3x36 3.36x36 M142
TM6
6x48 6.48x48 W287
6x55 6.55x55 I294
TM7
7x34 7.35x34 Y312
7x38 7.39x38 I316
7x42 7.43x42 Y320