Structure information

TA1 receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

8JLJ

SPECIES

Mus musculus

RESOLUTION

3.100

PREFERRED CHAIN

R

REFERENCE

10.1038/S41586-023-06804-Z

PUBLICATION DATE

Nov. 15, 2023

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Ligand Interaction Browser

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Ligand Amino Acid Generic Number Segment Interaction Type
Ligand Amino Acid Generic Number Segment Interaction Type
CHEMBL1182312 I103 3.33x33 TM3 hydrophobic
CHEMBL1182312 Y153 4.56x56 TM4 polar (hydrogen bond)
CHEMBL1182312 A193 5.42x43 TM5 Van der Waals
CHEMBL1182312 S197 5.46x461 TM5 polar (hydrogen bond)
CHEMBL1182312 W261 6.48x48 TM6 Van der Waals
CHEMBL1182312 F264 6.51x51 TM6 Van der Waals
CHEMBL1182312 F264 6.51x51 TM6 hydrophobic
CHEMBL1182312 F265 6.52x52 TM6 Van der Waals
CHEMBL1182312 F265 6.52x52 TM6 hydrophobic
CHEMBL1182312 Y287 7.39x38 TM7 Van der Waals
CHEMBL1182312 Y287 7.39x38 TM7 hydrophobic
CHEMBL1182312 G290 7.42x41 TM7 Van der Waals
CHEMBL1182312 Y291 7.43x42 TM7 Van der Waals
CHEMBL1182312 Y291 7.43x42 TM7 hydrophobic

Ligands

CHEMBL1182312

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Residue Diagrams

L N G V L T A L I I L S M L S Y L S A Q 1 H S M A I V D F L L G L C I M P C S M V R 2 F A L H F I S A S S L M I D T S T H V K 3 I L V M I L V S W S L P A V Y A F G M I 4 Y V F L M V S G P I Y F S T M F A L V G S 5 G I M V G V F L V C W C P F F L C T V L 6 M P N L A S N L Y G F W Y L A D N L S 7
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ICL1 K Q L H ICL1ECL1 C W Y F ECL1ICL2 P L R Y K A K I ICL2ECL2 L N L K G V E E L Y R S Q V S D L G G C S P F F ECL2ICL3 L E G K S Q ICL3ECL3 Y V I ECL3N-term M H L C H A I T N I S H R N S D W S R E N-termC-term G K I F Q K D S S R S K L F L C-term V Q A S L Y S L M S L I I L A T L V G N L I V I I S I S H F T P T N W L L H S M A I V D F L L G C L I M P C S M V R T V E R G E I L C K V H T S T D I M L S S A S I F H L A F I S I D R Y C A V C D N I S T I L V M I L V S W S L P A V Y A F G M I F L E S K V S G V L A F M T S F Y I P G S V M L F V Y Y R I Y F I A K G Q A R S I N R T N V Q V G A P Q S K E T K A A K T L G I M V G V F L V C W C P F F L C T V L D P F L G P P S L N D A L Y W F G Y L N S A L N P M V Y A F F Y P W L K M F R R A V L L
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Residue Table


GPCRdb(A)
GPCRdb(A)
TA1 receptor
TM3
3x33 3.33x33 I103
TM4
4x56 4.56x56 Y153
TM5
5x43 5.42x43 A193
5x461 5.46x461 S197
TM6
6x48 6.48x48 W261
6x51 6.51x51 F264
6x52 6.52x52 F265
TM7
7x38 7.39x38 Y287
7x41 7.42x41 G290
7x42 7.43x42 Y291