Structure information

succinate receptor

PROTEIN CLASS

Class A (Rhodopsin)

PDB CODE

8YKX

SPECIES

Homo sapiens

RESOLUTION

2.690

PREFERRED CHAIN

R

REFERENCE

10.1038/S41422-024-00984-7

PUBLICATION DATE

May 29, 2024
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Ligand Interaction Browser

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LigandAmino AcidGeneric NumberSegmentInteraction Type
Ligand
Amino Acid
Generic Number
Segment
Interaction Type
Ligand
Amino Acid
Generic Number
Segment
Interaction Type
maleic acid L79 2.60x60 TM2 hydrophobic
maleic acid R99 3.29x29 TM3 polar (charge-assisted hydrogen bond)
maleic acid D174 45.52x52 ECL2 polar (charge-assisted hydrogen bond)
maleic acid R281 7.39x38 TM7 polar (charge-assisted hydrogen bond)
LigandAmino AcidGeneric NumberSegmentInteraction Type
Showing 1 to 4 of 4 entries

Ligands

maleic acid

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Residue Diagrams

T N G L V G V V F E I G Y F I S L Y Y K 1 F N L S V S D L A F L C T L P M L I R S 2 F T L F L I S T Y L N A H L V Y R N S I 3 A I L I S L A I W V L V T L E L L P I 4 Y F F C M V F L P I L F G L L T L C M S Y 5 I M A V V I F S V L F T P Y H V M R N V 6 V P N I V S N L F A L P R T V I Y F S 7
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ICL1 ECL1 ICL2 ECL2 ICL3 ECL3 N-term C-term C K N W L A A E A A L E K Y Y L S I F Y G I E F V V G V L G N T I V V Y G Y I F S L N S S N I Y L F N L S V S D L A F L C T L P M L I R S Y A N G D V L C I S N R Y V L H A N L Y T S I L F L T F I S I D R Y L I I K Y K K E F A I L I S L A I W V L V T L E L L P I L P L I N P V D P N Y N L I Y S M C L T L L G F L I P L F V M C F F Y Y K I A L F L K Q R N R Q V A L E K P L N L V I M A V V I F S V L F T P Y H V M R N V R I A S R L G Y Q C T Q V V I N S F Y I V T R P L A F L N S V I N P V F Y F L L G D H L M N N F K F R D M Q L R H S L
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Residue Table


GPCRdb(A)
GPCRdb(A)
succinate receptor
TM2
2x60 2.60x60 L79
TM3
3x29 3.29x29 R99
ECL2
45x52 45.52x52 D174
TM7
7x38 7.39x38 R281