GPBA receptor - Gs

GPCR CLASS (FAMILY)

Class A (Rhodopsin)

GPCR SPECIES

Homo sapiens

GPCR PREFERRED CHAIN

R

G PROTEIN (FAMILY)

Gs

G PROTEIN SPECIES

Homo sapiens

PDB CODE

RESOLUTION

3.9 Å

REFERENCE

PUBLICATION DATE

Sept. 2, 2020

3D VIEW

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LIGAND INTERACTIONS

LIGANDS

No ligands

PHYSIOLOGICAL LIGANDS

cholic acid, deoxycholic acid, chenodeoxycholic acid, lithocholic acid



GPCR - G protein interface interactions



The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle (Gα residues) and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid, hydrophobic - dashed, ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.


Interaction cut-off:

Residue numbering:
R17Y23E24G.H5GproteinQ6x33E3x49D5x71GPCRInteractions:AromaticHydrophobicIonicPolarVan der waalsG Protein segments:G.H5GPCR segments:TM3TM5TM6

GPCR-G protein backbone (bb) or sidechain (sc):





Structures

Sequence Color

ACDEFGHIKLMNPQRSTVWY-_+van-der-waalshydrophobicionicaromaticpolar
null3x493x503x533x545x615x625x655x685x695x715x725x796x33G.H5.26G.H5.25G.H5.24G.H5.23G.H5.20G.H5.19G.H5.17G.H5.16G.H5.15G.H5.12G.h4s6.03G.H4.17G.H4.16Res. Pos.GPBA (7BW0)- (7BW0)--------------ERAVVLAQLDIVQERAVVLAQLDIVQPYLHQLRLLRTERI

, , , GPCR
Interaction cut-off: strict (stick), loose (line)

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