TA1 receptor - Gq

GPCR CLASS (FAMILY)

Class A (Rhodopsin)

GPCR SPECIES

Mus musculus

GPCR PREFERRED CHAIN

R

G PROTEIN (FAMILY)

Gq/11

G PROTEIN SPECIES

Homo sapiens

PDB CODE

8WCB

RESOLUTION

3.1 Å

REFERENCE

10.1016/J.CELL.2023.10.014

PUBLICATION DATE

Dec. 27, 2023

3D VIEW

NGL is a WebGL based 3D viewer powered by MMTF.

LIGAND INTERACTIONS

4 interactions (Click to see)

LIGANDS

Cyclohexylammonium ion - Agonist pubchem

PHYSIOLOGICAL LIGANDS

3-iodothyronamine, β-phenylethylamine, tyramine



GPCR - G protein interface interactions



The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle (Gα residues) and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid, hydrophobic - dashed, ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.


Interaction cut-off:

Residue numbering:

GPCR-G protein backbone (bb) or sidechain (sc):





Structures

Sequence Color

Gα, Gβ, Gγ, GPCR
Interaction cut-off: strict (stick), loose (line)

NGL is a WebGL based 3D viewer powered by MMTF.

Interaction
type		 GPCR
Segment
AA
Number		 Generic
number		 Gα
segment
AA
Number		 Generic
number
Hydrophobic H8 P 306 8x48 G.H5 N 392 G.H5.24
Hydrophobic ICL2 L 128 - G.H5 I 383 G.H5.15
Van-der-waals ICL2 L 128 - G.H5 I 383 G.H5.15
Polar ICL2 Y 130 - G.H5 Y 391 G.H5.23
Van-der-waals ICL2 Y 130 - G.H5 Y 391 G.H5.23
Hydrophobic ICL2 P 127 - G.H5 I 383 G.H5.15
Van-der-waals ICL2 P 127 - G.H5 I 383 G.H5.15
Polar H8 W 307 8x49 G.H5 E 390 G.H5.22
Van-der-waals H8 W 307 8x49 G.H5 E 390 G.H5.22
Hydrophobic ICL2 L 128 - G.H5 F 376 G.H5.08
Van-der-waals ICL2 L 128 - G.H5 F 376 G.H5.08
Van-der-waals ICL4 F 304 - G.H5 N 392 G.H5.24
Hydrophobic H8 Y 305 8x47 G.H5 Y 391 G.H5.23
Van-der-waals H8 Y 305 8x47 G.H5 Y 391 G.H5.23
Polar ICL2 K 131 - G.hns1 R 38 G.hns1.02
Hydrophobic ICL2 K 131 - G.hns1 R 38 G.hns1.02
Van-der-waals ICL2 K 131 - G.hns1 R 38 G.hns1.02
Hydrophobic ICL2 A 132 - G.hns1 R 39 G.hns1.03
Hydrophobic TM5 I 215 5x64 G.H5 L 384 G.H5.16
Hydrophobic TM5 A 216 5x65 G.H5 L 393 G.H5.25
Hydrophobic TM6 L 250 6x37 G.H5 L 393 G.H5.25
Polar TM5 Q 219 5x68 G.H5 Q 385 G.H5.17
Van-der-waals TM5 Q 219 5x68 G.H5 Q 385 G.H5.17
Hydrophobic ICL2 L 128 - G.S1 L 41 G.S1.02
Hydrophobic TM5 Q 219 5x68 G.H5 L 388 G.H5.20
Hydrophobic ICL2 P 127 - G.H5 K 380 G.H5.12
Aromatic TM3 R 120 3x50 G.H5 Y 391 G.H5.23
Hydrophobic TM3 R 120 3x50 G.H5 Y 391 G.H5.23
Hydrophobic TM5 Q 219 5x68 G.H5 L 384 G.H5.16
Van-der-waals TM5 Q 219 5x68 G.H5 L 384 G.H5.16
Hydrophobic ICL2 L 128 - G.H5 K 380 G.H5.12
Van-der-waals ICL2 L 128 - G.H5 K 380 G.H5.12
Hydrophobic ICL2 V 124 - G.H5 L 384 G.H5.16
Van-der-waals ICL2 V 124 - G.H5 L 384 G.H5.16
Ionic ICL2 R 129 - G.s2s3 D 215 G.s2s3.01
Polar ICL2 R 129 - G.s2s3 D 215 G.s2s3.01
Hydrophobic ICL2 R 129 - G.s2s3 D 215 G.s2s3.01
Van-der-waals ICL2 R 129 - G.s2s3 D 215 G.s2s3.01
Polar TM6 T 249 6x36 G.H5 N 392 G.H5.24
Hydrophobic ICL2 L 128 - G.S3 F 219 G.S3.03
Hydrophobic ICL2 V 124 - G.H5 L 388 G.H5.20
Van-der-waals ICL2 V 124 - G.H5 L 388 G.H5.20
Hydrophobic H8 Y 305 8x47 G.H5 N 392 G.H5.24
Van-der-waals H8 Y 305 8x47 G.H5 N 392 G.H5.24
Hydrophobic TM5 I 212 5x61 G.H5 L 393 G.H5.25
Van-der-waals TM5 I 212 5x61 G.H5 L 393 G.H5.25
Hydrophobic TM5 A 216 5x65 G.H5 L 388 G.H5.20
Hydrophobic ICL2 V 124 - G.H5 Y 391 G.H5.23
Hydrophobic ICL2 P 127 - G.H5 L 384 G.H5.16
Van-der-waals ICL2 P 127 - G.H5 L 384 G.H5.16
Hydrophobic TM6 K 245 6x32 G.H5 V 394 G.H5.26
Hydrophobic ICL2 V 124 - G.H5 N 387 G.H5.19
Polar ICL2 A 123 - G.H5 N 387 G.H5.19
Hydrophobic ICL2 A 123 - G.H5 N 387 G.H5.19
Van-der-waals ICL2 A 123 - G.H5 N 387 G.H5.19
Polar ICL2 I 134 - G.hns1 R 38 G.hns1.02
Hydrophobic ICL2 A 123 - G.H5 Y 391 G.H5.23
Van-der-waals ICL2 A 123 - G.H5 Y 391 G.H5.23
Hydrophobic ICL2 R 129 - G.S3 V 217 G.S3.01
Polar TM6 A 246 6x33 G.H5 L 393 G.H5.25
Hydrophobic TM6 A 246 6x33 G.H5 L 393 G.H5.25
Van-der-waals TM6 A 246 6x33 G.H5 L 393 G.H5.25
Van-der-waals ICL2 P 127 - G.H5 N 387 G.H5.19
Aromatic H8 W 307 8x49 G.H5 Y 391 G.H5.23
Hydrophobic H8 W 307 8x49 G.H5 Y 391 G.H5.23
Van-der-waals H8 W 307 8x49 G.H5 Y 391 G.H5.23
Hydrophobic ICL2 L 128 - G.H5 C 379 G.H5.11
Hydrophobic TM6 K 245 6x32 G.H5 L 393 G.H5.25
Van-der-waals TM6 K 245 6x32 G.H5 L 393 G.H5.25
Hydrophobic ICL2 L 128 - G.S3 V 217 G.S3.01