β3-adrenoceptor - Gs

GPCR CLASS (FAMILY)

Class A (Rhodopsin)

GPCR SPECIES

Homo sapiens

GPCR PREFERRED CHAIN

R

G PROTEIN (FAMILY)

Gs

G PROTEIN SPECIES

Homo sapiens

PDB CODE

9IJE

RESOLUTION

2.3 Å

REFERENCE

PUBLICATION DATE

Aug. 21, 2024

3D VIEW

NGL is a WebGL based 3D viewer powered by MMTF.

LIGAND INTERACTIONS

30 interactions (Click to see)

LIGANDS

(-)-adrenaline - Agonist pubchem gtoplig chembl_ligand drugbank drug_central pubchem

PHYSIOLOGICAL LIGANDS

(-)-noradrenaline, (-)-adrenaline, (±)-adrenaline, (+)-adrenaline



GPCR - G protein interface interactions



The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle (Gα residues) and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid, hydrophobic - dashed, ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.


Interaction cut-off:

Residue numbering:

GPCR-G protein backbone (bb) or sidechain (sc):





Structures

Sequence Color

Gα, Gβ, Gγ, GPCR
Interaction cut-off: strict (stick), loose (line)

NGL is a WebGL based 3D viewer powered by MMTF.

Interaction
type		 GPCR
Segment
AA
Number		 Generic
number		 Gα
segment
AA
Number		 Generic
number
Hydrophobic TM5 V 230 5x64 G.H5 Q 374 G.H5.16
Ionic ICL3 R 244 - G.hgh4 D 313 G.hgh4.13
Polar TM6 A 290 6x33 G.H5 L 383 G.H5.25
Hydrophobic TM6 A 290 6x33 G.H5 L 383 G.H5.25
Hydrophobic TM5 V 227 5x61 G.H5 L 383 G.H5.25
Polar TM5 Q 234 5x68 G.H5 D 371 G.H5.13
Van-der-waals TM5 Q 234 5x68 G.H5 D 371 G.H5.13
Hydrophobic TM5 A 231 5x65 G.H5 L 383 G.H5.25
Polar TM3 T 140 3x55 G.H5 R 370 G.H5.12
Hydrophobic ICL2 R 144 - G.S3 V 217 G.S3.01
Hydrophobic TM5 L 235 5x69 G.H5 L 384 G.H5.26
Hydrophobic ICL2 L 143 - G.H5 F 366 G.H5.08
Van-der-waals ICL2 L 143 - G.H5 F 366 G.H5.08
Hydrophobic ICL3 F 245 - G.H4 L 336 G.H4.16
Hydrophobic ICL2 L 143 - G.S1 H 41 G.S1.02
Van-der-waals ICL2 L 143 - G.S1 H 41 G.S1.02
Hydrophobic ICL2 L 143 - G.H5 I 373 G.H5.15
Van-der-waals ICL2 L 143 - G.H5 I 373 G.H5.15
Hydrophobic ICL3 F 245 - G.h4s6 T 340 G.h4s6.03
Van-der-waals ICL3 F 245 - G.h4s6 T 340 G.h4s6.03
Hydrophobic ICL3 R 244 - G.H4 L 336 G.H4.16
Van-der-waals ICL3 R 244 - G.H4 L 336 G.H4.16
Hydrophobic ICL2 Y 145 - G.H5 H 377 G.H5.19
Ionic TM5 E 241 5x75 G.H5 R 375 G.H5.17
Polar TM5 E 241 5x75 G.H5 R 375 G.H5.17
Van-der-waals TM5 E 241 5x75 G.H5 R 375 G.H5.17
Hydrophobic ICL3 F 245 - G.H4 R 337 G.H4.17
Van-der-waals ICL3 F 245 - G.H4 R 337 G.H4.17
Polar TM5 Q 234 5x68 G.H5 R 375 G.H5.17
Hydrophobic TM5 Q 234 5x68 G.H5 R 375 G.H5.17
Polar TM6 R 289 6x32 G.H5 E 382 G.H5.24
Van-der-waals TM6 R 289 6x32 G.H5 E 382 G.H5.24
Hydrophobic TM5 Q 234 5x68 G.H5 L 378 G.H5.20
Van-der-waals TM5 Q 234 5x68 G.H5 L 378 G.H5.20
Hydrophobic ICL2 P 142 - G.H5 R 370 G.H5.12
Hydrophobic TM5 L 238 5x72 G.h4s6 Y 348 G.h4s6.20
Van-der-waals TM5 L 238 5x72 G.h4s6 Y 348 G.h4s6.20
Polar TM5 Q 234 5x68 G.H5 Q 374 G.H5.16
Van-der-waals TM5 Q 234 5x68 G.H5 Q 374 G.H5.16
Hydrophobic ICL2 L 143 - G.H5 R 370 G.H5.12
Hydrophobic ICL3 F 245 - G.H4 D 333 G.H4.13
Hydrophobic TM6 L 294 6x37 G.H5 L 383 G.H5.25
Polar TM6 T 293 6x36 G.H5 E 382 G.H5.24
Hydrophobic TM6 T 293 6x36 G.H5 E 382 G.H5.24
Van-der-waals TM6 T 293 6x36 G.H5 E 382 G.H5.24
Hydrophobic ICL2 L 143 - G.S3 V 217 G.S3.01
Ionic ICL2 R 144 - G.s2s3 D 215 G.s2s3.01
Polar ICL2 R 144 - G.s2s3 D 215 G.s2s3.01
Van-der-waals ICL2 R 144 - G.s2s3 D 215 G.s2s3.01
Hydrophobic ICL2 P 142 - G.H5 Q 374 G.H5.16
Hydrophobic TM6 R 289 6x32 G.H5 L 383 G.H5.25
Hydrophobic TM3 V 139 3x54 G.H5 L 378 G.H5.20
Hydrophobic TM6 T 293 6x36 G.H5 L 383 G.H5.25
Hydrophobic TM5 A 231 5x65 G.H5 L 378 G.H5.20
Aromatic TM3 R 135 3x50 G.H5 Y 381 G.H5.23
Hydrophobic TM3 R 135 3x50 G.H5 Y 381 G.H5.23
Polar TM2 T 72 2x39 G.H5 Y 381 G.H5.23
Van-der-waals TM2 T 72 2x39 G.H5 Y 381 G.H5.23
Hydrophobic ICL2 L 143 - G.H5 C 369 G.H5.11
Polar TM3 V 139 3x54 G.H5 Q 374 G.H5.16
Van-der-waals TM3 V 139 3x54 G.H5 Q 374 G.H5.16
Polar TM3 A 138 3x53 G.H5 H 377 G.H5.19
Van-der-waals TM3 A 138 3x53 G.H5 H 377 G.H5.19
Hydrophobic ICL2 P 142 - G.H5 I 373 G.H5.15
Van-der-waals ICL2 P 142 - G.H5 I 373 G.H5.15
Hydrophobic TM3 A 138 3x53 G.H5 Y 381 G.H5.23
Hydrophobic ICL2 P 142 - G.H5 H 377 G.H5.19