G15 -
NK1 receptor complex model
GPCR CLASS (FAMILY)
SPECIES
G PROTEIN FAMILY
DATE
3D VIEW
Tertiary structure confidence
(pLDDT score) avg.: 79.6
Confident (90-70)
Low (70-50)
Very low (<50)
Disordered
PTM Score: 0.7
iPTM Score: 0.7
PAE mean: 13.4
GPCR - G protein interface interactions
The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle
(Gα residues)
and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid,
hydrophobic - dashed,
ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.
GPCR-G protein backbone (bb) or sidechain (sc):
Structures
0 structures selected.
Sequence Color
Interaction frequency filter (%)
Gα,
GPCR
Interaction cut-off: strict (stick), loose (line)
Interaction type |
GPCR Segment |
AA |
Number |
Generic number |
Gα segment |
AA |
Number |
Generic number |
---|---|---|---|---|---|---|---|---|
Polar | H8 | R | 311 | 8x49 | G.H5 | E | 370 | G.H5.22 |
Polar | TM3 | D | 129 | 3x49 | G.H5 | Y | 367 | G.H5.19 |
Van-der-waals | TM3 | D | 129 | 3x49 | G.H5 | Y | 367 | G.H5.19 |
Hydrophobic | TM6 | A | 242 | 6x29 | G.H5 | L | 374 | G.H5.26 |
Van-der-waals | TM6 | A | 242 | 6x29 | G.H5 | L | 374 | G.H5.26 |
Hydrophobic | C-term | T | 356 | - | G.H1 | R | 63 | G.H1.09 |
Hydrophobic | C-term | R | 353 | - | G.S2 | E | 194 | G.S2.03 |
Van-der-waals | C-term | R | 353 | - | G.S2 | E | 194 | G.S2.03 |
Hydrophobic | ICL2 | L | 138 | - | G.H5 | R | 360 | G.H5.12 |
Van-der-waals | ICL2 | L | 138 | - | G.H5 | R | 360 | G.H5.12 |
Hydrophobic | C-term | S | 347 | - | G.H2 | H | 221 | G.H2.09 |
Van-der-waals | C-term | S | 347 | - | G.H2 | H | 221 | G.H2.09 |
Hydrophobic | ICL2 | R | 141 | - | G.H5 | Y | 367 | G.H5.19 |
Van-der-waals | ICL2 | R | 141 | - | G.H5 | Y | 367 | G.H5.19 |
Hydrophobic | C-term | T | 344 | - | G.H2 | I | 220 | G.H2.08 |
Van-der-waals | C-term | T | 344 | - | G.H2 | I | 220 | G.H2.08 |
Polar | C-term | T | 360 | - | G.S2 | S | 198 | G.S2.07 |
Van-der-waals | TM7 | L | 308 | 7x56 | G.H5 | N | 372 | G.H5.24 |
Hydrophobic | TM5 | G | 230 | 5x72 | G.S6 | F | 340 | G.S6.02 |
Van-der-waals | TM5 | G | 230 | 5x72 | G.S6 | F | 340 | G.S6.02 |
Hydrophobic | C-term | Y | 349 | - | G.S2 | I | 192 | G.S2.01 |
Van-der-waals | C-term | Y | 349 | - | G.S2 | I | 192 | G.S2.01 |
Hydrophobic | TM6 | R | 235 | 6x22 | G.h4s6 | V | 324 | G.h4s6.06 |
Van-der-waals | TM6 | R | 235 | 6x22 | G.h4s6 | V | 324 | G.h4s6.06 |
Hydrophobic | C-term | L | 354 | - | G.S2 | Y | 195 | G.S2.04 |
Hydrophobic | C-term | E | 355 | - | G.S2 | C | 196 | G.S2.05 |
Polar | H8 | R | 311 | 8x49 | G.H5 | N | 372 | G.H5.24 |
Hydrophobic | H8 | R | 311 | 8x49 | G.H5 | N | 372 | G.H5.24 |
Van-der-waals | H8 | R | 311 | 8x49 | G.H5 | N | 372 | G.H5.24 |
Hydrophobic | C-term | T | 339 | - | G.H3 | P | 265 | G.H3.16 |
Van-der-waals | C-term | T | 339 | - | G.H3 | P | 265 | G.H3.16 |
Hydrophobic | ICL2 | L | 138 | - | G.S3 | T | 202 | G.S3.01 |
Polar | C-term | S | 352 | - | G.S2 | I | 192 | G.S2.01 |
Van-der-waals | C-term | S | 352 | - | G.S2 | I | 192 | G.S2.01 |
Hydrophobic | TM6 | K | 243 | 6x30 | G.H5 | L | 368 | G.H5.20 |
Hydrophobic | TM3 | I | 134 | 3x54 | G.H5 | Y | 367 | G.H5.19 |
Ionic | H8 | R | 311 | 8x49 | G.H5 | D | 369 | G.H5.21 |
Polar | H8 | R | 311 | 8x49 | G.H5 | D | 369 | G.H5.21 |
Van-der-waals | H8 | R | 311 | 8x49 | G.H5 | D | 369 | G.H5.21 |
Hydrophobic | TM5 | I | 228 | 5x70 | G.h4s6 | R | 338 | G.h4s6.20 |
Van-der-waals | TM5 | I | 228 | 5x70 | G.h4s6 | R | 338 | G.h4s6.20 |
Ionic | H8 | D | 310 | 8x48 | G.h4s6 | R | 335 | G.h4s6.17 |
Polar | H8 | D | 310 | 8x48 | G.h4s6 | R | 335 | G.h4s6.17 |
Van-der-waals | H8 | D | 310 | 8x48 | G.h4s6 | R | 335 | G.h4s6.17 |
Polar | C-term | L | 354 | - | G.S2 | C | 196 | G.S2.05 |
Van-der-waals | C-term | L | 354 | - | G.S2 | C | 196 | G.S2.05 |
Hydrophobic | ICL2 | P | 140 | - | G.hns1 | R | 40 | G.hns1.02 |
Van-der-waals | ICL2 | P | 140 | - | G.hns1 | R | 40 | G.hns1.02 |
Ionic | ICL2 | R | 141 | - | G.H5 | E | 370 | G.H5.22 |
Polar | ICL2 | R | 141 | - | G.H5 | E | 370 | G.H5.22 |
Hydrophobic | ICL2 | R | 141 | - | G.H5 | E | 370 | G.H5.22 |
Van-der-waals | ICL2 | R | 141 | - | G.H5 | E | 370 | G.H5.22 |
Hydrophobic | C-term | Y | 341 | - | G.h2s4 | E | 224 | G.h2s4.02 |
Van-der-waals | C-term | Y | 341 | - | G.h2s4 | E | 224 | G.h2s4.02 |
Polar | TM2 | T | 67 | 2x39 | G.H5 | Y | 367 | G.H5.19 |
Hydrophobic | TM5 | P | 229 | 5x71 | G.H5 | D | 361 | G.H5.13 |
Van-der-waals | TM5 | P | 229 | 5x71 | G.H5 | D | 361 | G.H5.13 |
Hydrophobic | TM6 | M | 249 | 6x36 | G.H5 | L | 373 | G.H5.25 |
Van-der-waals | TM6 | M | 249 | 6x36 | G.H5 | L | 373 | G.H5.25 |
Polar | C-term | T | 356 | - | G.S2 | C | 196 | G.S2.05 |
Hydrophobic | C-term | T | 356 | - | G.S2 | C | 196 | G.S2.05 |
Van-der-waals | C-term | T | 356 | - | G.S2 | C | 196 | G.S2.05 |
Polar | TM5 | D | 231 | 5x73 | G.S6 | L | 339 | G.S6.01 |
Polar | C-term | L | 354 | - | G.S2 | E | 194 | G.S2.03 |
Van-der-waals | C-term | L | 354 | - | G.S2 | E | 194 | G.S2.03 |
Polar | C-term | S | 352 | - | G.S2 | E | 194 | G.S2.03 |
Van-der-waals | C-term | S | 352 | - | G.S2 | E | 194 | G.S2.03 |
Ionic | TM6 | R | 235 | 6x22 | G.h4s6 | D | 325 | G.h4s6.07 |
Polar | TM6 | R | 235 | 6x22 | G.h4s6 | D | 325 | G.h4s6.07 |
Van-der-waals | TM6 | R | 235 | 6x22 | G.h4s6 | D | 325 | G.h4s6.07 |
Hydrophobic | C-term | T | 360 | - | G.H1 | H | 66 | G.H1.12 |
Van-der-waals | C-term | T | 360 | - | G.H1 | H | 66 | G.H1.12 |
Van-der-waals | C-term | V | 351 | - | G.S2 | I | 192 | G.S2.01 |
Polar | C-term | S | 352 | - | G.S2 | N | 193 | G.S2.02 |
Van-der-waals | C-term | S | 352 | - | G.S2 | N | 193 | G.S2.02 |
Hydrophobic | TM4 | S | 143 | 4x38 | G.hns1 | R | 40 | G.hns1.02 |
Hydrophobic | TM7 | L | 308 | 7x56 | G.H5 | L | 373 | G.H5.25 |
Polar | C-term | S | 359 | - | G.H1 | H | 66 | G.H1.12 |
Hydrophobic | ICL2 | L | 138 | - | G.S1 | L | 43 | G.S1.02 |
Van-der-waals | ICL2 | L | 138 | - | G.S1 | L | 43 | G.S1.02 |
Hydrophobic | ICL2 | P | 137 | - | G.H5 | L | 364 | G.H5.16 |
Hydrophobic | TM5 | P | 229 | 5x71 | G.S6 | F | 340 | G.S6.02 |
Van-der-waals | TM5 | P | 229 | 5x71 | G.S6 | F | 340 | G.S6.02 |
Hydrophobic | C-term | I | 358 | - | G.S2 | F | 197 | G.S2.06 |
Van-der-waals | C-term | I | 358 | - | G.S2 | F | 197 | G.S2.06 |
Polar | TM3 | R | 130 | 3x50 | G.H5 | Y | 367 | G.H5.19 |
Hydrophobic | TM3 | R | 130 | 3x50 | G.H5 | Y | 367 | G.H5.19 |
Van-der-waals | TM3 | R | 130 | 3x50 | G.H5 | Y | 367 | G.H5.19 |
Hydrophobic | C-term | T | 356 | - | G.S2 | F | 197 | G.S2.06 |
Polar | H8 | N | 309 | 8x47 | G.H5 | I | 371 | G.H5.23 |
Hydrophobic | H8 | N | 309 | 8x47 | G.H5 | I | 371 | G.H5.23 |
Van-der-waals | H8 | N | 309 | 8x47 | G.H5 | I | 371 | G.H5.23 |
Hydrophobic | C-term | V | 362 | - | G.H5 | R | 353 | G.H5.05 |
Hydrophobic | C-term | V | 351 | - | G.S2 | E | 194 | G.S2.03 |
Hydrophobic | C-term | T | 356 | - | G.h1ha | G | 67 | G.h1ha.01 |
Polar | C-term | K | 350 | - | G.S2 | I | 192 | G.S2.01 |
Polar | C-term | Y | 349 | - | G.H2 | H | 221 | G.H2.09 |
Aromatic | C-term | Y | 349 | - | G.H2 | H | 221 | G.H2.09 |
Hydrophobic | C-term | Y | 349 | - | G.H2 | H | 221 | G.H2.09 |
Van-der-waals | C-term | Y | 349 | - | G.H2 | H | 221 | G.H2.09 |
Polar | C-term | R | 353 | - | G.S2 | C | 196 | G.S2.05 |
Hydrophobic | C-term | R | 353 | - | G.S2 | C | 196 | G.S2.05 |
Hydrophobic | TM6 | V | 246 | 6x33 | G.H5 | L | 373 | G.H5.25 |
Van-der-waals | TM6 | V | 246 | 6x33 | G.H5 | L | 373 | G.H5.25 |
Hydrophobic | ICL2 | L | 138 | - | G.H5 | F | 356 | G.H5.08 |
Van-der-waals | ICL2 | L | 138 | - | G.H5 | F | 356 | G.H5.08 |
Hydrophobic | TM2 | T | 67 | 2x39 | G.H5 | I | 371 | G.H5.23 |
Hydrophobic | TM3 | A | 133 | 3x53 | G.H5 | Y | 367 | G.H5.19 |
Van-der-waals | TM3 | A | 133 | 3x53 | G.H5 | Y | 367 | G.H5.19 |
Hydrophobic | C-term | L | 342 | - | G.H3 | W | 266 | G.H3.17 |
Polar | TM6 | R | 235 | 6x22 | G.h4s6 | R | 337 | G.h4s6.19 |
Hydrophobic | C-term | I | 358 | - | G.S2 | V | 199 | G.S2.08 |
Hydrophobic | C-term | I | 358 | - | G.h1ha | G | 67 | G.h1ha.01 |
Van-der-waals | C-term | I | 358 | - | G.h1ha | G | 67 | G.h1ha.01 |
Hydrophobic | C-term | I | 358 | - | G.H1 | H | 66 | G.H1.12 |
Van-der-waals | C-term | I | 358 | - | G.H1 | H | 66 | G.H1.12 |
Hydrophobic | TM6 | Q | 239 | 6x26 | G.H5 | L | 374 | G.H5.26 |
Van-der-waals | TM6 | Q | 239 | 6x26 | G.H5 | L | 374 | G.H5.26 |
Van-der-waals | TM5 | G | 230 | 5x72 | G.S6 | L | 339 | G.S6.01 |
Hydrophobic | TM6 | V | 246 | 6x33 | G.H5 | L | 368 | G.H5.20 |
Polar | TM2 | T | 65 | 2x37 | G.H5 | E | 370 | G.H5.22 |
Hydrophobic | TM2 | T | 65 | 2x37 | G.H5 | E | 370 | G.H5.22 |
Van-der-waals | TM2 | T | 65 | 2x37 | G.H5 | E | 370 | G.H5.22 |
Hydrophobic | TM6 | A | 242 | 6x29 | G.H5 | L | 373 | G.H5.25 |
Van-der-waals | TM6 | A | 242 | 6x29 | G.H5 | L | 373 | G.H5.25 |
Hydrophobic | C-term | I | 358 | - | G.S2 | S | 198 | G.S2.07 |
Van-der-waals | C-term | I | 358 | - | G.S2 | S | 198 | G.S2.07 |
Ionic | TM5 | D | 231 | 5x73 | G.h4s6 | R | 338 | G.h4s6.20 |
Polar | TM5 | D | 231 | 5x73 | G.h4s6 | R | 338 | G.h4s6.20 |
Hydrophobic | TM5 | D | 231 | 5x73 | G.h4s6 | R | 338 | G.h4s6.20 |
Van-der-waals | TM5 | D | 231 | 5x73 | G.h4s6 | R | 338 | G.h4s6.20 |
Hydrophobic | ICL2 | L | 138 | - | G.H5 | V | 359 | G.H5.11 |
Polar | TM6 | Q | 239 | 6x26 | G.h4s6 | R | 338 | G.h4s6.20 |
Hydrophobic | TM6 | Q | 239 | 6x26 | G.h4s6 | R | 338 | G.h4s6.20 |
Van-der-waals | TM6 | Q | 239 | 6x26 | G.h4s6 | R | 338 | G.h4s6.20 |
Hydrophobic | TM3 | I | 134 | 3x54 | G.H5 | L | 364 | G.H5.16 |
Hydrophobic | C-term | V | 362 | - | G.s2s3 | Q | 200 | G.s2s3.01 |
Ionic | C-term | D | 330 | - | G.h4s6 | K | 332 | G.h4s6.14 |
Polar | C-term | D | 330 | - | G.h4s6 | K | 332 | G.h4s6.14 |
Van-der-waals | C-term | D | 330 | - | G.h4s6 | K | 332 | G.h4s6.14 |
Ionic | C-term | R | 353 | - | G.S1 | E | 42 | G.S1.01 |
Polar | C-term | R | 353 | - | G.S1 | E | 42 | G.S1.01 |
Hydrophobic | C-term | R | 353 | - | G.S1 | E | 42 | G.S1.01 |
Van-der-waals | C-term | R | 353 | - | G.S1 | E | 42 | G.S1.01 |
Hydrophobic | C-term | R | 353 | - | G.S3 | R | 205 | G.S3.04 |
Van-der-waals | C-term | R | 353 | - | G.S3 | R | 205 | G.S3.04 |
Hydrophobic | ICL2 | P | 137 | - | G.H5 | R | 360 | G.H5.12 |
Van-der-waals | ICL2 | P | 137 | - | G.H5 | R | 360 | G.H5.12 |
Hydrophobic | TM5 | P | 229 | 5x71 | G.H5 | K | 357 | G.H5.09 |
Van-der-waals | TM5 | P | 229 | 5x71 | G.H5 | K | 357 | G.H5.09 |
Hydrophobic | ICL2 | P | 137 | - | G.H5 | V | 363 | G.H5.15 |
Van-der-waals | ICL2 | P | 137 | - | G.H5 | V | 363 | G.H5.15 |
Polar | H8 | N | 309 | 8x47 | G.H5 | N | 372 | G.H5.24 |
Hydrophobic | H8 | N | 309 | 8x47 | G.H5 | N | 372 | G.H5.24 |
Van-der-waals | H8 | N | 309 | 8x47 | G.H5 | N | 372 | G.H5.24 |