Golf -
SST2 receptor complex model
GPCR CLASS (FAMILY)
SPECIES
G PROTEIN FAMILY
DATE
3D VIEW
Tertiary structure confidence
(pLDDT score) avg.: 82.1
Confident (90-70)
Low (70-50)
Very low (<50)
Disordered
PTM Score: 0.7
iPTM Score: 0.7
PAE mean: 13.9
GPCR - G protein interface interactions
The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle
(Gα residues)
and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid,
hydrophobic - dashed,
ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.
GPCR-G protein backbone (bb) or sidechain (sc):
Structures
0 structures selected.
Sequence Color
Interaction frequency filter (%)
Gα,
GPCR
Interaction cut-off: strict (stick), loose (line)
Interaction type |
GPCR Segment |
AA |
Number |
Generic number |
Gα segment |
AA |
Number |
Generic number |
---|---|---|---|---|---|---|---|---|
Polar | C-term | T | 359 | - | G.hns1 | K | 40 | G.hns1.02 |
Hydrophobic | C-term | T | 359 | - | G.hns1 | K | 40 | G.hns1.02 |
Van-der-waals | C-term | T | 359 | - | G.hns1 | K | 40 | G.hns1.02 |
Hydrophobic | TM6 | R | 247 | 6x26 | G.H5 | R | 372 | G.H5.17 |
Van-der-waals | TM6 | R | 247 | 6x26 | G.H5 | R | 372 | G.H5.17 |
Hydrophobic | ICL2 | P | 147 | 34x50 | G.H5 | Q | 371 | G.H5.16 |
Polar | TM4 | R | 157 | 4x40 | G.HN | Q | 33 | G.HN.48 |
Hydrophobic | TM4 | R | 157 | 4x40 | G.HN | Q | 33 | G.HN.48 |
Van-der-waals | TM4 | R | 157 | 4x40 | G.HN | Q | 33 | G.HN.48 |
Polar | C-term | D | 364 | - | G.HN | R | 36 | G.HN.51 |
Hydrophobic | C-term | D | 364 | - | G.HN | R | 36 | G.HN.51 |
Van-der-waals | C-term | D | 364 | - | G.HN | R | 36 | G.HN.51 |
Polar | ICL2 | K | 152 | 34x55 | G.s2s3 | K | 203 | G.s2s3.02 |
Van-der-waals | ICL2 | K | 152 | 34x55 | G.s2s3 | K | 203 | G.s2s3.02 |
Polar | H8 | S | 316 | 8x47 | G.H5 | E | 379 | G.H5.24 |
Hydrophobic | H8 | S | 316 | 8x47 | G.H5 | E | 379 | G.H5.24 |
Van-der-waals | H8 | S | 316 | 8x47 | G.H5 | E | 379 | G.H5.24 |
Hydrophobic | C-term | Q | 357 | - | G.h3s5 | I | 272 | G.h3s5.03 |
Van-der-waals | C-term | Q | 357 | - | G.h3s5 | I | 272 | G.h3s5.03 |
Polar | ICL2 | R | 154 | 34x57 | G.H5 | Y | 378 | G.H5.23 |
Hydrophobic | ICL2 | R | 154 | 34x57 | G.H5 | Y | 378 | G.H5.23 |
Van-der-waals | ICL2 | R | 154 | 34x57 | G.H5 | Y | 378 | G.H5.23 |
Ionic | TM6 | R | 247 | 6x26 | G.H5 | D | 368 | G.H5.13 |
Polar | TM6 | R | 247 | 6x26 | G.H5 | D | 368 | G.H5.13 |
Hydrophobic | TM6 | R | 247 | 6x26 | G.H5 | D | 368 | G.H5.13 |
Van-der-waals | TM6 | R | 247 | 6x26 | G.H5 | D | 368 | G.H5.13 |
Polar | C-term | G | 363 | - | G.hns1 | K | 40 | G.hns1.02 |
Hydrophobic | C-term | G | 363 | - | G.hns1 | K | 40 | G.hns1.02 |
Van-der-waals | C-term | G | 363 | - | G.hns1 | K | 40 | G.hns1.02 |
Hydrophobic | C-term | T | 356 | - | G.h2s4 | D | 227 | G.h2s4.03 |
Van-der-waals | C-term | T | 356 | - | G.h2s4 | D | 227 | G.h2s4.03 |
Polar | TM5 | S | 238 | 5x68 | G.H5 | D | 368 | G.H5.13 |
Van-der-waals | TM5 | S | 238 | 5x68 | G.H5 | D | 368 | G.H5.13 |
Polar | TM5 | K | 234 | 5x64 | G.H5 | Q | 371 | G.H5.16 |
Hydrophobic | TM5 | K | 234 | 5x64 | G.H5 | Q | 371 | G.H5.16 |
Van-der-waals | TM5 | K | 234 | 5x64 | G.H5 | Q | 371 | G.H5.16 |
Polar | C-term | N | 362 | - | G.H5 | Q | 377 | G.H5.22 |
Hydrophobic | C-term | N | 362 | - | G.H5 | Q | 377 | G.H5.22 |
Van-der-waals | C-term | N | 362 | - | G.H5 | Q | 377 | G.H5.22 |
Polar | ICL3 | R | 241 | - | G.H5 | N | 364 | G.H5.09 |
Hydrophobic | TM3 | V | 144 | 3x54 | G.H5 | L | 375 | G.H5.20 |
Van-der-waals | TM3 | V | 144 | 3x54 | G.H5 | L | 375 | G.H5.20 |
Hydrophobic | TM3 | A | 143 | 3x53 | G.H5 | Y | 378 | G.H5.23 |
Van-der-waals | TM3 | A | 143 | 3x53 | G.H5 | Y | 378 | G.H5.23 |
Hydrophobic | ICL2 | I | 148 | 34x51 | G.H5 | R | 367 | G.H5.12 |
Hydrophobic | ICL2 | I | 148 | 34x51 | G.S1 | H | 43 | G.S1.02 |
Hydrophobic | C-term | T | 353 | - | G.H3 | W | 268 | G.H3.17 |
Van-der-waals | C-term | T | 353 | - | G.H3 | W | 268 | G.H3.17 |
Hydrophobic | TM6 | M | 257 | 6x36 | G.H5 | E | 379 | G.H5.24 |
Van-der-waals | TM6 | M | 257 | 6x36 | G.H5 | E | 379 | G.H5.24 |
Hydrophobic | ICL2 | P | 147 | 34x50 | G.H5 | H | 374 | G.H5.19 |
Hydrophobic | TM2 | T | 78 | 2x39 | G.H5 | Y | 378 | G.H5.23 |
Van-der-waals | TM2 | T | 78 | 2x39 | G.H5 | Y | 378 | G.H5.23 |
Polar | C-term | N | 362 | - | G.hns1 | K | 40 | G.hns1.02 |
Van-der-waals | C-term | N | 362 | - | G.hns1 | K | 40 | G.hns1.02 |
Hydrophobic | C-term | L | 360 | - | G.h2s4 | D | 227 | G.h2s4.03 |
Van-der-waals | C-term | L | 360 | - | G.h2s4 | D | 227 | G.h2s4.03 |
Polar | TM6 | K | 253 | 6x32 | G.H5 | L | 381 | G.H5.26 |
Hydrophobic | TM6 | K | 253 | 6x32 | G.H5 | L | 381 | G.H5.26 |
Van-der-waals | TM6 | K | 253 | 6x32 | G.H5 | L | 381 | G.H5.26 |
Polar | TM2 | T | 78 | 2x39 | G.H5 | Q | 377 | G.H5.22 |
Hydrophobic | ICL2 | P | 147 | 34x50 | G.H5 | I | 370 | G.H5.15 |
Hydrophobic | ICL2 | I | 148 | 34x51 | G.S3 | V | 204 | G.S3.01 |
Van-der-waals | ICL2 | I | 148 | 34x51 | G.S3 | V | 204 | G.S3.01 |
Hydrophobic | TM6 | M | 257 | 6x36 | G.H5 | L | 380 | G.H5.25 |
Van-der-waals | TM6 | M | 257 | 6x36 | G.H5 | L | 380 | G.H5.25 |
Hydrophobic | TM6 | V | 258 | 6x37 | G.H5 | L | 380 | G.H5.25 |
Van-der-waals | TM6 | V | 258 | 6x37 | G.H5 | L | 380 | G.H5.25 |
Polar | C-term | L | 365 | - | G.HN | R | 36 | G.HN.51 |
Hydrophobic | C-term | L | 365 | - | G.HN | R | 36 | G.HN.51 |
Van-der-waals | C-term | L | 365 | - | G.HN | R | 36 | G.HN.51 |
Hydrophobic | ICL2 | I | 148 | 34x51 | G.H5 | I | 370 | G.H5.15 |
Van-der-waals | ICL2 | I | 148 | 34x51 | G.H5 | I | 370 | G.H5.15 |
Hydrophobic | TM6 | V | 254 | 6x33 | G.H5 | L | 375 | G.H5.20 |
Hydrophobic | TM6 | V | 254 | 6x33 | G.H5 | L | 381 | G.H5.26 |
Hydrophobic | TM5 | V | 235 | 5x65 | G.H5 | L | 375 | G.H5.20 |
Van-der-waals | TM5 | V | 235 | 5x65 | G.H5 | L | 375 | G.H5.20 |
Polar | TM3 | D | 139 | 3x49 | G.H5 | Y | 378 | G.H5.23 |
Hydrophobic | TM3 | D | 139 | 3x49 | G.H5 | Y | 378 | G.H5.23 |
Van-der-waals | TM3 | D | 139 | 3x49 | G.H5 | Y | 378 | G.H5.23 |
Polar | TM6 | K | 246 | 6x25 | G.h4s6 | T | 337 | G.h4s6.03 |
Van-der-waals | TM6 | K | 246 | 6x25 | G.h4s6 | T | 337 | G.h4s6.03 |
Polar | C-term | G | 363 | - | G.HN | R | 36 | G.HN.51 |
Hydrophobic | C-term | G | 363 | - | G.HN | R | 36 | G.HN.51 |
Van-der-waals | C-term | G | 363 | - | G.HN | R | 36 | G.HN.51 |
Polar | H8 | N | 318 | 8x49 | G.H5 | E | 379 | G.H5.24 |
Hydrophobic | H8 | N | 318 | 8x49 | G.H5 | E | 379 | G.H5.24 |
Van-der-waals | H8 | N | 318 | 8x49 | G.H5 | E | 379 | G.H5.24 |
Polar | ICL2 | R | 154 | 34x57 | G.H5 | H | 374 | G.H5.19 |
Aromatic | ICL2 | R | 154 | 34x57 | G.H5 | H | 374 | G.H5.19 |
Van-der-waals | ICL2 | R | 154 | 34x57 | G.H5 | H | 374 | G.H5.19 |
Hydrophobic | C-term | L | 361 | - | G.H5 | H | 374 | G.H5.19 |
Van-der-waals | C-term | L | 361 | - | G.H5 | H | 374 | G.H5.19 |
Polar | TM3 | R | 140 | 3x50 | G.H5 | Y | 378 | G.H5.23 |
Hydrophobic | TM3 | R | 140 | 3x50 | G.H5 | Y | 378 | G.H5.23 |
Van-der-waals | TM3 | R | 140 | 3x50 | G.H5 | Y | 378 | G.H5.23 |
Hydrophobic | C-term | L | 361 | - | G.H5 | M | 373 | G.H5.18 |
Van-der-waals | C-term | L | 361 | - | G.H5 | M | 373 | G.H5.18 |
Polar | C-term | Q | 357 | - | G.h3s5 | T | 271 | G.h3s5.02 |
Hydrophobic | C-term | Q | 357 | - | G.h3s5 | T | 271 | G.h3s5.02 |
Van-der-waals | C-term | Q | 357 | - | G.h3s5 | T | 271 | G.h3s5.02 |
Hydrophobic | ICL2 | P | 147 | 34x50 | G.H5 | R | 367 | G.H5.12 |
Van-der-waals | ICL2 | P | 147 | 34x50 | G.H5 | R | 367 | G.H5.12 |
Polar | TM5 | S | 238 | 5x68 | G.H5 | Q | 371 | G.H5.16 |
Polar | TM6 | V | 254 | 6x33 | G.H5 | L | 380 | G.H5.25 |
Hydrophobic | TM6 | V | 254 | 6x33 | G.H5 | L | 380 | G.H5.25 |
Van-der-waals | TM6 | V | 254 | 6x33 | G.H5 | L | 380 | G.H5.25 |
Polar | TM3 | A | 143 | 3x53 | G.H5 | H | 374 | G.H5.19 |
Hydrophobic | TM3 | A | 143 | 3x53 | G.H5 | H | 374 | G.H5.19 |
Van-der-waals | TM3 | A | 143 | 3x53 | G.H5 | H | 374 | G.H5.19 |
Polar | H8 | D | 317 | 8x48 | G.H5 | E | 379 | G.H5.24 |
Hydrophobic | H8 | D | 317 | 8x48 | G.H5 | E | 379 | G.H5.24 |
Van-der-waals | H8 | D | 317 | 8x48 | G.H5 | E | 379 | G.H5.24 |
Polar | TM3 | V | 144 | 3x54 | G.H5 | Q | 371 | G.H5.16 |
Hydrophobic | TM3 | V | 144 | 3x54 | G.H5 | Q | 371 | G.H5.16 |
Van-der-waals | TM3 | V | 144 | 3x54 | G.H5 | Q | 371 | G.H5.16 |
Hydrophobic | ICL3 | V | 242 | - | G.S6 | Y | 347 | G.S6.02 |
Van-der-waals | ICL3 | V | 242 | - | G.S6 | Y | 347 | G.S6.02 |
Hydrophobic | TM6 | S | 250 | 6x29 | G.H5 | L | 381 | G.H5.26 |
Van-der-waals | TM6 | S | 250 | 6x29 | G.H5 | L | 381 | G.H5.26 |
Hydrophobic | TM4 | R | 155 | 4x38 | G.HN | L | 37 | G.HN.52 |
Hydrophobic | C-term | L | 361 | - | G.H5 | Q | 377 | G.H5.22 |
Van-der-waals | C-term | L | 361 | - | G.H5 | Q | 377 | G.H5.22 |