GPCR CLASS (FAMILY)
SPECIES
G PROTEIN FAMILY
DATE
3D VIEW
Tertiary structure confidence
(pLDDT score) avg.: 80.5
Confident (90-70)
Low (70-50)
Very low (<50)
Disordered
PTM Score: 0.6
iPTM Score: 0.3
PAE mean: 21.4
GPCR - G protein interface interactions
The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle
(Gα residues)
and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid,
hydrophobic - dashed,
ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.
GPCR-G protein backbone (bb) or sidechain (sc):
Structures
0 structures selected.
Sequence Color
Interaction frequency filter (%)
Gα,
GPCR
Interaction cut-off: strict (stick), loose (line)
Interaction type |
GPCR Segment |
AA |
Number |
Generic number |
Gα segment |
AA |
Number |
Generic number |
---|---|---|---|---|---|---|---|---|
Hydrophobic | TM2 | M | 60 | 2x43 | G.H5 | I | 352 | G.H5.23 |
Van-der-waals | TM2 | M | 60 | 2x43 | G.H5 | I | 352 | G.H5.23 |
Hydrophobic | TM3 | K | 116 | 3x47 | G.H5 | L | 354 | G.H5.25 |
Hydrophobic | ICL2 | K | 135 | 34x54 | G.s2s3 | E | 194 | G.s2s3.02 |
Van-der-waals | ICL2 | K | 135 | 34x54 | G.s2s3 | E | 194 | G.s2s3.02 |
Hydrophobic | TM3 | R | 122 | 3x53 | G.H5 | I | 352 | G.H5.23 |
Van-der-waals | TM3 | R | 122 | 3x53 | G.H5 | I | 352 | G.H5.23 |
Hydrophobic | H8 | P | 301 | 8x48 | G.H5 | K | 350 | G.H5.21 |
Hydrophobic | ICL2 | F | 132 | 34x51 | G.s2s3 | E | 194 | G.s2s3.02 |
Van-der-waals | ICL2 | F | 132 | 34x51 | G.s2s3 | E | 194 | G.s2s3.02 |
Hydrophobic | TM2 | G | 56 | 2x39 | G.H5 | I | 352 | G.H5.23 |
Van-der-waals | TM2 | G | 56 | 2x39 | G.H5 | I | 352 | G.H5.23 |
Polar | ICL2 | K | 135 | 34x54 | G.s2s3 | K | 193 | G.s2s3.01 |
Hydrophobic | ICL2 | K | 135 | 34x54 | G.s2s3 | K | 193 | G.s2s3.01 |
Van-der-waals | ICL2 | K | 135 | 34x54 | G.s2s3 | K | 193 | G.s2s3.01 |
Aromatic | TM5 | H | 226 | 5x71 | G.H5 | F | 335 | G.H5.06 |
Hydrophobic | TM5 | H | 226 | 5x71 | G.H5 | F | 335 | G.H5.06 |
Van-der-waals | TM5 | H | 226 | 5x71 | G.H5 | F | 335 | G.H5.06 |
Hydrophobic | TM3 | R | 122 | 3x53 | G.H5 | L | 349 | G.H5.20 |
Van-der-waals | TM3 | R | 122 | 3x53 | G.H5 | L | 349 | G.H5.20 |
Polar | TM6 | H | 242 | 6x31 | G.H5 | Q | 346 | G.H5.17 |
Hydrophobic | TM2 | D | 57 | 2x40 | G.H5 | I | 352 | G.H5.23 |
Van-der-waals | TM2 | D | 57 | 2x40 | G.H5 | I | 352 | G.H5.23 |
Hydrophobic | TM7 | G | 299 | 7x56 | G.H5 | C | 355 | G.H5.26 |
Van-der-waals | TM7 | G | 299 | 7x56 | G.H5 | C | 355 | G.H5.26 |
Hydrophobic | TM6 | S | 238 | 6x27 | G.H5 | V | 343 | G.H5.14 |
Polar | TM3 | Y | 119 | 3x50 | G.H5 | G | 353 | G.H5.24 |
Hydrophobic | TM3 | Y | 119 | 3x50 | G.H5 | G | 353 | G.H5.24 |
Van-der-waals | TM3 | Y | 119 | 3x50 | G.H5 | G | 353 | G.H5.24 |
Polar | ICL1 | T | 52 | - | G.hns1 | R | 31 | G.hns1.02 |
Hydrophobic | ICL1 | T | 52 | - | G.hns1 | R | 31 | G.hns1.02 |
Van-der-waals | ICL1 | T | 52 | - | G.hns1 | R | 31 | G.hns1.02 |
Polar | TM6 | A | 241 | 6x30 | G.H5 | Q | 346 | G.H5.17 |
Hydrophobic | TM6 | A | 241 | 6x30 | G.H5 | Q | 346 | G.H5.17 |
Van-der-waals | TM6 | A | 241 | 6x30 | G.H5 | Q | 346 | G.H5.17 |
Polar | H8 | R | 305 | 8x52 | G.h3s5 | N | 262 | G.h3s5.02 |
Hydrophobic | H8 | R | 305 | 8x52 | G.h3s5 | N | 262 | G.h3s5.02 |
Van-der-waals | H8 | R | 305 | 8x52 | G.h3s5 | N | 262 | G.h3s5.02 |
Van-der-waals | H8 | R | 305 | 8x52 | G.h3s5 | I | 261 | G.h3s5.01 |
Polar | TM1 | Y | 43 | 1x57 | G.H5 | Y | 351 | G.H5.22 |
Van-der-waals | TM1 | Y | 43 | 1x57 | G.H5 | Y | 351 | G.H5.22 |
Hydrophobic | TM6 | A | 245 | 6x34 | G.H5 | Q | 346 | G.H5.17 |
Van-der-waals | TM6 | A | 245 | 6x34 | G.H5 | Q | 346 | G.H5.17 |
Hydrophobic | TM6 | S | 238 | 6x27 | G.S6 | Y | 321 | G.S6.02 |
Polar | TM3 | Y | 119 | 3x50 | G.H5 | L | 354 | G.H5.25 |
Hydrophobic | TM3 | Y | 119 | 3x50 | G.H5 | L | 354 | G.H5.25 |
Van-der-waals | TM3 | Y | 119 | 3x50 | G.H5 | L | 354 | G.H5.25 |
Hydrophobic | TM6 | A | 245 | 6x34 | G.H5 | C | 355 | G.H5.26 |
Van-der-waals | TM6 | A | 245 | 6x34 | G.H5 | C | 355 | G.H5.26 |
Hydrophobic | TM3 | F | 118 | 3x49 | G.H5 | I | 352 | G.H5.23 |
Hydrophobic | TM6 | P | 237 | 6x26 | G.S6 | Y | 321 | G.S6.02 |
Hydrophobic | TM6 | P | 237 | 6x26 | G.h4s6 | E | 319 | G.h4s6.12 |
Van-der-waals | TM6 | P | 237 | 6x26 | G.h4s6 | E | 319 | G.h4s6.12 |
Hydrophobic | TM3 | I | 123 | 3x54 | G.H5 | L | 349 | G.H5.20 |
Van-der-waals | TM3 | I | 123 | 3x54 | G.H5 | L | 349 | G.H5.20 |
Hydrophobic | TM5 | H | 223 | 5x68 | G.H5 | A | 339 | G.H5.10 |
Polar | TM4 | I | 139 | 4x39 | G.hns1 | R | 32 | G.hns1.03 |
Hydrophobic | TM4 | I | 139 | 4x39 | G.hns1 | R | 32 | G.hns1.03 |
Polar | H8 | R | 305 | 8x52 | G.H5 | Y | 351 | G.H5.22 |
Van-der-waals | H8 | R | 305 | 8x52 | G.H5 | Y | 351 | G.H5.22 |
Hydrophobic | TM6 | P | 237 | 6x26 | G.S6 | I | 320 | G.S6.01 |
Van-der-waals | TM6 | P | 237 | 6x26 | G.S6 | I | 320 | G.S6.01 |
Hydrophobic | ICL2 | N | 125 | 34x44 | G.s2s3 | K | 193 | G.s2s3.01 |
Van-der-waals | ICL2 | N | 125 | 34x44 | G.s2s3 | K | 193 | G.s2s3.01 |
Polar | TM3 | Y | 119 | 3x50 | G.H5 | I | 352 | G.H5.23 |
Hydrophobic | TM3 | Y | 119 | 3x50 | G.H5 | I | 352 | G.H5.23 |
Van-der-waals | TM3 | Y | 119 | 3x50 | G.H5 | I | 352 | G.H5.23 |
Hydrophobic | TM6 | F | 252 | 6x41 | G.H5 | L | 354 | G.H5.25 |
Hydrophobic | TM3 | F | 118 | 3x49 | G.H5 | L | 349 | G.H5.20 |
Ionic | TM5 | H | 223 | 5x68 | G.H5 | D | 338 | G.H5.09 |
Hydrophobic | TM2 | M | 60 | 2x43 | G.H5 | G | 353 | G.H5.24 |
Van-der-waals | TM2 | M | 60 | 2x43 | G.H5 | G | 353 | G.H5.24 |
Hydrophobic | TM4 | V | 140 | 4x40 | G.hns1 | R | 32 | G.hns1.03 |
Van-der-waals | TM4 | V | 140 | 4x40 | G.hns1 | R | 32 | G.hns1.03 |
Polar | H8 | N | 300 | 8x47 | G.H5 | K | 350 | G.H5.21 |
Hydrophobic | H8 | N | 300 | 8x47 | G.H5 | K | 350 | G.H5.21 |
Van-der-waals | H8 | N | 300 | 8x47 | G.H5 | K | 350 | G.H5.21 |
Hydrophobic | TM6 | A | 248 | 6x37 | G.H5 | C | 355 | G.H5.26 |
Ionic | TM5 | H | 223 | 5x68 | G.H5 | D | 342 | G.H5.13 |
Polar | TM5 | H | 223 | 5x68 | G.H5 | D | 342 | G.H5.13 |
Hydrophobic | TM5 | H | 223 | 5x68 | G.H5 | D | 342 | G.H5.13 |
Hydrophobic | TM5 | M | 227 | 5x72 | G.H5 | A | 339 | G.H5.10 |
Van-der-waals | TM5 | M | 227 | 5x72 | G.H5 | A | 339 | G.H5.10 |
Polar | H8 | N | 300 | 8x47 | G.H5 | C | 355 | G.H5.26 |
Van-der-waals | H8 | N | 300 | 8x47 | G.H5 | C | 355 | G.H5.26 |
Hydrophobic | H8 | P | 301 | 8x48 | G.H5 | Y | 351 | G.H5.22 |
Polar | ICL2 | N | 125 | 34x44 | G.H5 | D | 338 | G.H5.09 |
Hydrophobic | TM3 | I | 123 | 3x54 | G.H5 | I | 345 | G.H5.16 |
Polar | ICL1 | L | 53 | - | G.hns1 | R | 31 | G.hns1.02 |
Hydrophobic | ICL1 | L | 53 | - | G.hns1 | R | 31 | G.hns1.02 |
Van-der-waals | ICL1 | L | 53 | - | G.hns1 | R | 31 | G.hns1.02 |
Hydrophobic | TM6 | H | 242 | 6x31 | G.H5 | D | 342 | G.H5.13 |
Polar | ICL1 | T | 52 | - | G.HN | S | 27 | G.HN.51 |
Hydrophobic | TM7 | L | 296 | 7x53 | G.H5 | G | 353 | G.H5.24 |
Van-der-waals | TM7 | L | 296 | 7x53 | G.H5 | G | 353 | G.H5.24 |
Hydrophobic | H8 | G | 302 | 8x49 | G.H5 | Y | 351 | G.H5.22 |
Polar | ICL2 | R | 136 | 34x55 | G.s2s3 | E | 194 | G.s2s3.02 |
Hydrophobic | ICL2 | R | 136 | 34x55 | G.s2s3 | E | 194 | G.s2s3.02 |
Van-der-waals | ICL2 | R | 136 | 34x55 | G.s2s3 | E | 194 | G.s2s3.02 |
Hydrophobic | TM7 | L | 296 | 7x53 | G.H5 | L | 354 | G.H5.25 |
Hydrophobic | TM2 | P | 54 | 2x37 | G.hns1 | R | 31 | G.hns1.02 |
Van-der-waals | TM2 | P | 54 | 2x37 | G.hns1 | R | 31 | G.hns1.02 |
Hydrophobic | TM5 | N | 230 | 5x75 | G.H5 | F | 335 | G.H5.06 |
Van-der-waals | TM5 | N | 230 | 5x75 | G.H5 | F | 335 | G.H5.06 |
Hydrophobic | TM3 | R | 122 | 3x53 | G.H5 | I | 345 | G.H5.16 |
Van-der-waals | TM3 | R | 122 | 3x53 | G.H5 | I | 345 | G.H5.16 |
Polar | TM3 | Y | 119 | 3x50 | G.H5 | L | 349 | G.H5.20 |
Hydrophobic | TM3 | Y | 119 | 3x50 | G.H5 | L | 349 | G.H5.20 |
Van-der-waals | TM3 | Y | 119 | 3x50 | G.H5 | L | 349 | G.H5.20 |
Hydrophobic | TM3 | L | 115 | 3x46 | G.H5 | L | 354 | G.H5.25 |
Polar | H8 | N | 300 | 8x47 | G.H5 | Y | 351 | G.H5.22 |
Hydrophobic | H8 | N | 300 | 8x47 | G.H5 | Y | 351 | G.H5.22 |
Van-der-waals | H8 | N | 300 | 8x47 | G.H5 | Y | 351 | G.H5.22 |
Hydrophobic | H8 | N | 300 | 8x47 | G.H5 | G | 353 | G.H5.24 |
Van-der-waals | H8 | N | 300 | 8x47 | G.H5 | G | 353 | G.H5.24 |