GPCR CLASS (FAMILY)
SPECIES
G PROTEIN FAMILY
DATE
3D VIEW
Tertiary structure confidence
(pLDDT score) avg.: 78.5
Confident (90-70)
Low (70-50)
Very low (<50)
Disordered
PTM Score: 0.7
iPTM Score: 0.5
PAE mean: 18.1
GPCR - G protein interface interactions
The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle
(Gα residues)
and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid,
hydrophobic - dashed,
ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.
GPCR-G protein backbone (bb) or sidechain (sc):
Structures
0 structures selected.
Sequence Color
Interaction frequency filter (%)
Gα,
GPCR
Interaction cut-off: strict (stick), loose (line)
Interaction type |
GPCR Segment |
AA |
Number |
Generic number |
Gα segment |
AA |
Number |
Generic number |
---|---|---|---|---|---|---|---|---|
Polar | ICL3 | R | 209 | - | G.h4s6 | S | 349 | G.h4s6.02 |
Van-der-waals | ICL3 | R | 209 | - | G.h4s6 | S | 349 | G.h4s6.02 |
Hydrophobic | ICL3 | R | 209 | - | G.H4 | L | 346 | G.H4.16 |
Van-der-waals | ICL3 | R | 209 | - | G.H4 | L | 346 | G.H4.16 |
Polar | TM3 | I | 107 | 3x54 | G.H5 | Q | 384 | G.H5.16 |
Hydrophobic | TM3 | I | 107 | 3x54 | G.H5 | Q | 384 | G.H5.16 |
Van-der-waals | TM3 | I | 107 | 3x54 | G.H5 | Q | 384 | G.H5.16 |
Polar | TM2 | Y | 44 | 2x39 | G.H5 | E | 392 | G.H5.24 |
Polar | ICL2 | T | 109 | 34x44 | G.H5 | Q | 384 | G.H5.16 |
Hydrophobic | ICL2 | T | 109 | 34x44 | G.H5 | Q | 384 | G.H5.16 |
Ionic | ICL2 | D | 111 | 34x46 | G.H5 | R | 380 | G.H5.12 |
Polar | ICL2 | D | 111 | 34x46 | G.H5 | R | 380 | G.H5.12 |
Hydrophobic | ICL2 | D | 111 | 34x46 | G.H5 | R | 380 | G.H5.12 |
Van-der-waals | ICL2 | D | 111 | 34x46 | G.H5 | R | 380 | G.H5.12 |
Polar | TM6 | R | 213 | 6x27 | G.H5 | R | 385 | G.H5.17 |
Hydrophobic | TM6 | R | 213 | 6x27 | G.H5 | R | 385 | G.H5.17 |
Van-der-waals | TM6 | R | 213 | 6x27 | G.H5 | R | 385 | G.H5.17 |
Polar | TM3 | K | 106 | 3x53 | G.H5 | Y | 391 | G.H5.23 |
Hydrophobic | TM3 | K | 106 | 3x53 | G.H5 | Y | 391 | G.H5.23 |
Van-der-waals | TM3 | K | 106 | 3x53 | G.H5 | Y | 391 | G.H5.23 |
Ionic | TM5 | H | 198 | 5x68 | G.H5 | D | 381 | G.H5.13 |
Polar | TM5 | H | 198 | 5x68 | G.H5 | D | 381 | G.H5.13 |
Hydrophobic | TM5 | H | 198 | 5x68 | G.H5 | D | 381 | G.H5.13 |
Van-der-waals | TM5 | H | 198 | 5x68 | G.H5 | D | 381 | G.H5.13 |
Hydrophobic | TM6 | H | 217 | 6x31 | G.H5 | Q | 384 | G.H5.16 |
Van-der-waals | TM6 | H | 217 | 6x31 | G.H5 | Q | 384 | G.H5.16 |
Hydrophobic | TM5 | L | 195 | 5x65 | G.H5 | L | 388 | G.H5.20 |
Hydrophobic | TM3 | I | 107 | 3x54 | G.H5 | Y | 391 | G.H5.23 |
Hydrophobic | TM5 | M | 202 | 5x72 | G.H5 | D | 381 | G.H5.13 |
Van-der-waals | TM5 | M | 202 | 5x72 | G.H5 | D | 381 | G.H5.13 |
Polar | TM3 | Y | 103 | 3x50 | G.H5 | Y | 391 | G.H5.23 |
Hydrophobic | TM3 | Y | 103 | 3x50 | G.H5 | Y | 391 | G.H5.23 |
Van-der-waals | TM3 | Y | 103 | 3x50 | G.H5 | Y | 391 | G.H5.23 |
Polar | TM5 | H | 198 | 5x68 | G.H5 | Q | 384 | G.H5.16 |
Hydrophobic | TM5 | H | 198 | 5x68 | G.H5 | Q | 384 | G.H5.16 |
Van-der-waals | TM5 | H | 198 | 5x68 | G.H5 | Q | 384 | G.H5.16 |
Ionic | TM6 | H | 217 | 6x31 | G.H5 | D | 381 | G.H5.13 |
Polar | TM6 | H | 217 | 6x31 | G.H5 | D | 381 | G.H5.13 |
Van-der-waals | TM6 | H | 217 | 6x31 | G.H5 | D | 381 | G.H5.13 |
Polar | TM3 | K | 106 | 3x53 | G.H5 | H | 387 | G.H5.19 |
Hydrophobic | TM3 | K | 106 | 3x53 | G.H5 | H | 387 | G.H5.19 |
Van-der-waals | TM3 | K | 106 | 3x53 | G.H5 | H | 387 | G.H5.19 |
Hydrophobic | TM6 | A | 216 | 6x30 | G.H5 | L | 394 | G.H5.26 |
Van-der-waals | TM6 | A | 216 | 6x30 | G.H5 | L | 394 | G.H5.26 |
Hydrophobic | TM7 | G | 275 | 7x56 | G.H5 | E | 392 | G.H5.24 |
Van-der-waals | TM7 | G | 275 | 7x56 | G.H5 | E | 392 | G.H5.24 |
Aromatic | TM3 | F | 102 | 3x49 | G.H5 | Y | 391 | G.H5.23 |
Hydrophobic | TM3 | F | 102 | 3x49 | G.H5 | Y | 391 | G.H5.23 |
Van-der-waals | TM3 | F | 102 | 3x49 | G.H5 | Y | 391 | G.H5.23 |
Hydrophobic | TM6 | A | 220 | 6x34 | G.H5 | L | 388 | G.H5.20 |
Hydrophobic | TM3 | I | 107 | 3x54 | G.H5 | L | 393 | G.H5.25 |
Van-der-waals | TM3 | I | 107 | 3x54 | G.H5 | L | 393 | G.H5.25 |
Polar | H8 | I | 276 | 8x47 | G.H5 | E | 392 | G.H5.24 |
Hydrophobic | H8 | I | 276 | 8x47 | G.H5 | E | 392 | G.H5.24 |
Van-der-waals | H8 | I | 276 | 8x47 | G.H5 | E | 392 | G.H5.24 |
Hydrophobic | TM3 | I | 107 | 3x54 | G.H5 | H | 387 | G.H5.19 |
Polar | ICL2 | T | 109 | 34x44 | G.H5 | R | 380 | G.H5.12 |
Hydrophobic | ICL2 | T | 109 | 34x44 | G.H5 | R | 380 | G.H5.12 |
Van-der-waals | ICL2 | T | 109 | 34x44 | G.H5 | R | 380 | G.H5.12 |
Polar | TM6 | A | 220 | 6x34 | G.H5 | L | 393 | G.H5.25 |
Hydrophobic | TM6 | A | 220 | 6x34 | G.H5 | L | 393 | G.H5.25 |
Van-der-waals | TM6 | A | 220 | 6x34 | G.H5 | L | 393 | G.H5.25 |
Aromatic | TM6 | R | 213 | 6x27 | G.S6 | Y | 360 | G.S6.02 |
Hydrophobic | TM6 | R | 213 | 6x27 | G.S6 | Y | 360 | G.S6.02 |
Van-der-waals | TM6 | R | 213 | 6x27 | G.S6 | Y | 360 | G.S6.02 |
Hydrophobic | TM1 | W | 30 | 1x56 | G.H5 | E | 392 | G.H5.24 |
Van-der-waals | TM1 | W | 30 | 1x56 | G.H5 | E | 392 | G.H5.24 |
Polar | TM5 | S | 194 | 5x64 | G.H5 | Q | 384 | G.H5.16 |
Polar | ICL3 | R | 209 | - | G.S6 | C | 359 | G.S6.01 |
Hydrophobic | ICL3 | R | 209 | - | G.S6 | C | 359 | G.S6.01 |
Van-der-waals | ICL3 | R | 209 | - | G.S6 | C | 359 | G.S6.01 |
Hydrophobic | TM6 | H | 217 | 6x31 | G.H5 | L | 388 | G.H5.20 |
Hydrophobic | TM3 | Y | 103 | 3x50 | G.H5 | L | 393 | G.H5.25 |
Van-der-waals | TM3 | Y | 103 | 3x50 | G.H5 | L | 393 | G.H5.25 |
Polar | ICL3 | G | 208 | - | G.hgh4 | D | 323 | G.hgh4.13 |
Hydrophobic | ICL3 | G | 208 | - | G.hgh4 | D | 323 | G.hgh4.13 |
Van-der-waals | ICL3 | G | 208 | - | G.hgh4 | D | 323 | G.hgh4.13 |
Hydrophobic | TM5 | M | 202 | 5x72 | G.S6 | Y | 360 | G.S6.02 |
Hydrophobic | TM5 | L | 195 | 5x65 | G.H5 | Q | 384 | G.H5.16 |
Polar | TM6 | R | 213 | 6x27 | G.S6 | C | 359 | G.S6.01 |
Hydrophobic | TM6 | R | 213 | 6x27 | G.S6 | C | 359 | G.S6.01 |
Van-der-waals | TM6 | R | 213 | 6x27 | G.S6 | C | 359 | G.S6.01 |
Hydrophobic | ICL3 | A | 207 | - | G.hgh4 | D | 323 | G.hgh4.13 |
Van-der-waals | ICL3 | A | 207 | - | G.hgh4 | D | 323 | G.hgh4.13 |
Polar | TM6 | H | 217 | 6x31 | G.H5 | R | 385 | G.H5.17 |
Hydrophobic | ICL3 | A | 207 | - | G.hgh4 | T | 325 | G.hgh4.15 |
Hydrophobic | H8 | P | 277 | 8x48 | G.H5 | E | 392 | G.H5.24 |
Hydrophobic | TM5 | M | 202 | 5x72 | G.H5 | R | 385 | G.H5.17 |
Van-der-waals | TM5 | M | 202 | 5x72 | G.H5 | R | 385 | G.H5.17 |
Polar | TM2 | Y | 44 | 2x39 | G.H5 | Y | 391 | G.H5.23 |
Aromatic | TM2 | Y | 44 | 2x39 | G.H5 | Y | 391 | G.H5.23 |
Hydrophobic | TM2 | Y | 44 | 2x39 | G.H5 | Y | 391 | G.H5.23 |
Van-der-waals | TM2 | Y | 44 | 2x39 | G.H5 | Y | 391 | G.H5.23 |
Hydrophobic | ICL3 | R | 209 | - | G.S6 | P | 361 | G.S6.03 |
Van-der-waals | ICL3 | R | 209 | - | G.S6 | P | 361 | G.S6.03 |
Hydrophobic | TM3 | I | 107 | 3x54 | G.H5 | L | 388 | G.H5.20 |