BB1 receptor - Gq

GPCR CLASS (FAMILY)

Class A (Rhodopsin)

GPCR SPECIES

Homo sapiens

GPCR PREFERRED CHAIN

R

G PROTEIN (FAMILY)

Gq/11

G PROTEIN SPECIES

Homo sapiens

PDB CODE

8H0P

RESOLUTION

3.2 Å

REFERENCE

10.1038/S41422-022-00743-6

PUBLICATION DATE

Aug. 9, 2023

3D VIEW

NGL is a WebGL based 3D viewer powered by MMTF.

LIGAND INTERACTIONS

78 interactions (Click to see)

LIGANDS

NMB30 - Agonist

PHYSIOLOGICAL LIGANDS

neuromedin B, gastrin-releasing peptide, GRP-(18-27), gastrin releasing peptide(14-27) (human)



GPCR - G protein interface interactions



The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle (Gα residues) and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid, hydrophobic - dashed, ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.


Interaction cut-off:

Residue numbering:
R12G.H4C01Y02G.S6Q17N19N24V26G.H5GproteinN2x40P-T6x29Q6x26H-A3x53S8x49GPCRInteractions:AromaticHydrophobicIonicPolarVan der waalsG Protein segments:G.H4G.S6G.H5GPCR segments:TM2ICL2TM3ICL3TM6H8

GPCR-G protein backbone (bb) or sidechain (sc):





Structures

Sequence Color

ACDEFGHIKLMNPQRSTVWY-_+van-der-waalshydrophobicionicaromaticpolar
Res. Pos.

Gα, Gβ, Gγ, GPCR
Interaction cut-off: strict (stick), loose (line)

NGL is a WebGL based 3D viewer powered by MMTF.